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Sr Advisor / Scientific Director - Chemistry – Fragment Hit Elaboration

Eli Lilly and Company
Full-time
Remote friendly (San Francisco, CA)
United States
Clinical Research and Development

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Role Summary

Sr Advisor / Scientific Director - Chemistry – Fragment Hit Elaboration. Hands-on, lab-based role focused on developing internal capabilities in fragment-based ligand design (FBLD) within the Novel Platforms Fragment-based Discovery team. Lead early-stage medicinal chemistry from fragment hits to pre-lead candidates and collaborate across multidisciplinary teams to enable innovative therapeutic discovery.

Responsibilities

  • Lead strategy and execution for early-stage medicinal chemistry from fragment hit identification to pre-lead candidate nomination.
  • Triage and extract key pharmacophoric and structural insights from early biophysics and fragment screening data.
  • Coordinate with internal and external chemistry resources to prioritize and ensure timely delivery of the chemical matter.
  • Partner with chemistry, biophysics, structural biology and AI/ML teams to coordinate progression of fragment hits to portfolio candidates across several protein targets.

Qualifications

  • BS, MS, or PhD in chemistry with a focus on synthetic organic chemistry.
  • Experience in small molecule drug discovery in a biotechnology or pharmaceutical setting; BS with 10+ years, MS with 8+ years, or PhD with 5+ years of experience.
  • Demonstrated success in FBLD taking low affinity fragment hits to pre-lead candidate molecules (nM) and ideally beyond (IND, market).
  • Proficiency with molecular modeling, MD, FEP, AI-assisted design, and cheminformatics.
  • Ability to independently design experiments, troubleshoot challenges, and collaborate effectively in a fast-paced environment.

Skills

  • Strong expertise in fragment-based design and medicinal chemistry workflows.
  • Collaborative cross-functional communication and documentation.
  • Operational excellence with emphasis on data quality and reproducibility.
  • Adaptability in a fast-paced research environment.
  • Experience in lead compound optimization for potency, selectivity, ADME and PK (preferred).

Education

  • Not specified beyond degree requirements in qualifications.

Additional Requirements

  • Physical demands are those of a laboratory environment; travel required.