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Senior Automation Engineer, Platform Biology

Flagship Pioneering
August 26, 2026
Full-time
Remote friendly (Cambridge, MA)
Worldwide
Operations
Role: Early-career Automation Engineer to develop and scale automated biology workflows within Vesalius Therapeutics' platform, integrating robotics, software, and data systems. Responsibilities: design and optimize high-throughput automation protocols, collaborate with scientific and technical teams for workflow development, troubleshoot and validate automated procedures, develop scripts using Python or C#, build integrations with instruments and data platforms, and document processes. Requirements: Bachelor's or master's in computer science, engineering, bioengineering, or related field; experience in laboratory automation, scientific software, or biotech automation; familiarity with biological workflows such as cell culture, high-content imaging, or NGS; hands-on experience with automated liquid handlers and robotic systems; programming skills in Python and/or C#; strong communication skills. Preferred: exposure to cloud infrastructures (AWS), experience with platforms like Hamilton STAR, Tecan, or BioSero, familiarity with APIs, databases, LIMS/ELN, and data pipelines. High-value: focus on scaling automated cellular biology experiments, cross-disciplinary collaboration, and systems integration in a biotech R&D setting. Work setup: not explicitly specified but involves cross-functional teamwork and technical development.