Scientific Software Developer, Data Foundry
Eli Lilly and Company
9 days ago
Remote friendly (Indianapolis, IN)
United States
IT
Responsibilities
- Design, build, and maintain scientific data pipelines for chemical/biological/high-throughput and automation-generated data (FAIR compliance; machine-actionable).
- Develop RESTful APIs/microservices for programmatic access to LIMS, ELNs, instruments, and data warehouses (Postgres/Redshift/Snowflake).
- Improve LIMS/adjacent systems for evolving scientific, security, and scalability needs.
- Prototype dashboards and workflow tools with bench scientists; validate with feedback.
- Hand off mature prototypes to Tech@Lilly Product Engineering for enterprise scaling (criteria, documentation standards, SLAs).
- Build lab automation integrations (equipment, scheduling systems, instrument data streams) with metadata and execution traceability.
- Develop robotic workflow control, instrument driver interfaces, real-time data capture, and reusable automation components.
- Support agentic lab interfacing between automation platforms and AI experimental planning.
- Build/operate cloud-native components (AWS/Azure/GCP), containerized workflows (Kubernetes/Docker), IaC, CI/CD, and orchestration (Prefect/Airflow/Nextflow); apply DevSecOps (security scanning, testing).
Qualifications (Required)
- BS/MS in CS, Bioinformatics, Cheminformatics, Computational Biology, Chemistry/Biology, Biomedical Engineering, or related STEM.
- BS: 3+ years; MS: 1+ year scientific software development.
- Python + one other language (Java/C#/Go/TypeScript); SQL skills.
- US work authorization required; no visa sponsorship.
Qualifications (Preferred)
- REST APIs, data pipelines, microservices; cloud/container/Git; scientific/LIMS/ELN and instrument integration.
- Lab automation integration (OPC-UA, serial/USB, scheduling platforms); data warehousing/ontologies.
- Cheminformatics/bioinformatics tools; SciPy/NumPy; workflow orchestration (Prefect/Airflow/Nextflow/WDL); CI/CD.
Benefits
- 401(k), pension, vacation; medical/dental/vision; flexible benefits; life insurance; time off/leave; well-being benefits (e.g., EAP, fitness, clubs).
Location options: San Diego CA; San Francisco CA; Boston MA; Louisville CO; Indianapolis IN.
- Design, build, and maintain scientific data pipelines for chemical/biological/high-throughput and automation-generated data (FAIR compliance; machine-actionable).
- Develop RESTful APIs/microservices for programmatic access to LIMS, ELNs, instruments, and data warehouses (Postgres/Redshift/Snowflake).
- Improve LIMS/adjacent systems for evolving scientific, security, and scalability needs.
- Prototype dashboards and workflow tools with bench scientists; validate with feedback.
- Hand off mature prototypes to Tech@Lilly Product Engineering for enterprise scaling (criteria, documentation standards, SLAs).
- Build lab automation integrations (equipment, scheduling systems, instrument data streams) with metadata and execution traceability.
- Develop robotic workflow control, instrument driver interfaces, real-time data capture, and reusable automation components.
- Support agentic lab interfacing between automation platforms and AI experimental planning.
- Build/operate cloud-native components (AWS/Azure/GCP), containerized workflows (Kubernetes/Docker), IaC, CI/CD, and orchestration (Prefect/Airflow/Nextflow); apply DevSecOps (security scanning, testing).
Qualifications (Required)
- BS/MS in CS, Bioinformatics, Cheminformatics, Computational Biology, Chemistry/Biology, Biomedical Engineering, or related STEM.
- BS: 3+ years; MS: 1+ year scientific software development.
- Python + one other language (Java/C#/Go/TypeScript); SQL skills.
- US work authorization required; no visa sponsorship.
Qualifications (Preferred)
- REST APIs, data pipelines, microservices; cloud/container/Git; scientific/LIMS/ELN and instrument integration.
- Lab automation integration (OPC-UA, serial/USB, scheduling platforms); data warehousing/ontologies.
- Cheminformatics/bioinformatics tools; SciPy/NumPy; workflow orchestration (Prefect/Airflow/Nextflow/WDL); CI/CD.
Benefits
- 401(k), pension, vacation; medical/dental/vision; flexible benefits; life insurance; time off/leave; well-being benefits (e.g., EAP, fitness, clubs).
Location options: San Diego CA; San Francisco CA; Boston MA; Louisville CO; Indianapolis IN.