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Principal Associate Scientist, RNAi Discovery

Alnylam Pharmaceuticals
Full-time
On-site
Cambridge, MA
$93,800 - $140,600 USD yearly
Clinical Research and Development

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Role Summary

Principal Associate Scientist, RNAi Discovery — Onsite, Cambridge, MA. Lead high-throughput in vitro RNAi research within the RNAi Discovery group, driving target identification through lead candidate selection.

Responsibilities

  • Conduct a wide range of in vitro siRNA research studies to evaluate RNAi compounds using biochemical, molecular, and cell-based assays.
  • Plan, coordinate, and execute day-to-day high-throughput in vitro experiments, including transfection, RNA extraction, qPCR, data upload, and statistical analysis.
  • Design, perform, and interpret experiments independently and collaboratively, providing critical troubleshooting and technical insight.
  • Maintain and culture various cell types (iPSCs, primary cells, immortalized cell lines) to support research objectives and facilitate high-throughput siRNA screening through qPCR and cell-based assays.
  • Ensure accurate data recording, analysis, and timely reporting, preparing clear and detailed experimental summaries, documentation, and presentations.
  • Identify and resolve technical challenges, contributing to the ongoing optimization and development of experimental protocols.
  • Operate and maintain automated instrumentation and robotic systems to support high-throughput (384-well) screening workflows.

Qualifications

  • BS/MS in Biology, Molecular/Cell Biology, Biochemistry, or related field with 5–8 years of relevant experience, preferably in an industrial or biotech environment
  • Proficiency in mammalian cell culture, including maintenance and transfection of immortalized and primary cell lines
  • Skilled in molecular biology techniques for RNA, DNA, and protein quantification (qPCR, dPCR, Western blotting, ELISA, immunoprecipitation)
  • Prior experience or strong understanding of nucleic acid–based therapeutics (siRNA, ASO, CRISPR) highly desired
  • Hands-on experience with laboratory automation systems, including liquid-handling platforms such as PerkinElmer JANUS, Beckman i7, or similar
  • Strong knowledge of experimental design, data interpretation, and scientific troubleshooting
  • Highly detail-oriented, organized, and capable of managing multiple projects in a fast-paced, dynamic environment
  • Demonstrated ability to collaborate and communicate effectively with cross-functional teams and stakeholders
  • Proficiency with Microsoft Office (Excel, Outlook, PowerPoint, Word) and GraphPad Prism

Skills

  • In vitro RNAi assay design and analysis
  • High-throughput screening techniques
  • Cell culture and transfection of mammalian cells
  • qPCR, dPCR, protein quantification methods
  • Data interpretation and troubleshooting
  • Laboratory automation and robotic systems

Education

  • BS/MS in Biology, Molecular/Cell Biology, Biochemistry, or related field
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